Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC68Q9H2F9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC68Q9H2F9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC68Q9H2F9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
CCDC68Q9H2F9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC68Q9H2F9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC68Q9H2F9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC68Q9H2F9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CCDC68Q9H2F9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.65
CCDC68Q9H2F9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CCDC68Q9H2F9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 KRT16P5-201ENST00000455284 522 ntBASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 AC073648.6-201ENST00000641589 218 ntBASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 AL161938.1-201ENST00000569833 2180 ntBASIC19.08■□□□□ 0.64
CCDC68Q9H2F9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 TNXA-203ENST00000507684 2038 ntBASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 AL160286.2-201ENST00000567150 934 ntBASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 AC110285.5-201ENST00000611501 352 ntBASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC68Q9H2F9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 RN7SL471P-201ENST00000580476 299 ntBASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC68Q9H2F9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms