Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM2Q9C040 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM2Q9C040 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM2Q9C040 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 AC006333.2-201ENST00000607957 2099 ntBASIC17.51■□□□□ 0.39
TRIM2Q9C040 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM2Q9C040 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 KRT16P5-201ENST00000455284 522 ntBASIC17.51■□□□□ 0.39
TRIM2Q9C040 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM2Q9C040 AC233263.1-201ENST00000578059 224 ntBASIC17.51■□□□□ 0.39
TRIM2Q9C040 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 AL359736.2-201ENST00000621992 437 ntBASIC17.51■□□□□ 0.39
TRIM2Q9C040 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 AL023875.1-201ENST00000640777 796 ntBASIC17.51■□□□□ 0.39
TRIM2Q9C040 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM2Q9C040 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM2Q9C040 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM2Q9C040 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM2Q9C040 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM2Q9C040 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM2Q9C040 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM2Q9C040 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM2Q9C040 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM2Q9C040 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM2Q9C040 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM2Q9C040 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM2Q9C040 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM2Q9C040 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM2Q9C040 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM2Q9C040 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 KRASP1-201ENST00000407852 552 ntBASIC17.5■□□□□ 0.39
TRIM2Q9C040 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM2Q9C040 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM2Q9C040 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM2Q9C040 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM2Q9C040 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 UBE2SP1-201ENST00000450587 669 ntBASIC17.49■□□□□ 0.39
TRIM2Q9C040 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 RN7SL471P-201ENST00000580476 299 ntBASIC17.49■□□□□ 0.39
TRIM2Q9C040 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM2Q9C040 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 CROCCP3-202ENST00000420820 1947 ntBASIC17.49■□□□□ 0.39
TRIM2Q9C040 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM2Q9C040 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM2Q9C040 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM2Q9C040 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM2Q9C040 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM2Q9C040 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms