Protein–RNA interactions for Protein: Q9BVR0

HERC2P3, Putative HERC2-like protein 3, humanhuman

Predictions only

Length 1,158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3Q9BVR0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 MCCD1P1-208ENST00000445732 328 ntBASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 MIR3180-5-201ENST00000583743 153 ntBASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HERC2P3Q9BVR0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 KRT8P3-201ENST00000519669 1449 ntBASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 AL121894.2-201ENST00000602977 491 ntBASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 LINC01006-201ENST00000333319 2292 ntBASIC20.13■□□□□ 0.81
HERC2P3Q9BVR0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 AC092597.1-201ENST00000487352 616 ntBASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 CLEC4GP1-201ENST00000596555 870 ntBASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 AC024243.1-201ENST00000609234 778 ntBASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC2P3Q9BVR0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 AL645929.1-201ENST00000420084 975 ntBASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 ATP5G2P1-201ENST00000433580 426 ntBASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC2P3Q9BVR0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.1■□□□□ 0.81
HERC2P3Q9BVR0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms