Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 AC080038.1-201ENST00000611274 1154 ntBASIC16.34■□□□□ 0.21
NICN1Q9BSH3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 AP006587.1-201ENST00000534129 1502 ntBASIC16.34■□□□□ 0.21
NICN1Q9BSH3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NICN1Q9BSH3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NICN1Q9BSH3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.33■□□□□ 0.21
NICN1Q9BSH3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.33■□□□□ 0.21
NICN1Q9BSH3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NICN1Q9BSH3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NICN1Q9BSH3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
NICN1Q9BSH3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NICN1Q9BSH3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
NICN1Q9BSH3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 MIR663A-201ENST00000385250 93 ntBASIC16.33■□□□□ 0.2
NICN1Q9BSH3 DUSP5P2-201ENST00000426873 1033 ntBASIC16.33■□□□□ 0.2
NICN1Q9BSH3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.33■□□□□ 0.2
NICN1Q9BSH3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NICN1Q9BSH3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 CDCA4P2-201ENST00000441182 718 ntBASIC16.32■□□□□ 0.2
NICN1Q9BSH3 YBX1P10-201ENST00000444752 975 ntBASIC16.32■□□□□ 0.2
NICN1Q9BSH3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 AC092437.1-201ENST00000624794 1048 ntBASIC16.32■□□□□ 0.2
NICN1Q9BSH3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NICN1Q9BSH3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 AL133373.2-201ENST00000623187 2828 ntBASIC16.31■□□□□ 0.2
NICN1Q9BSH3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.31■□□□□ 0.2
NICN1Q9BSH3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms