Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.98■□□□□ 0.79
SMOQ99835 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SMOQ99835 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.98■□□□□ 0.79
SMOQ99835 AC092865.7-201ENST00000641832 219 ntBASIC19.98■□□□□ 0.79
SMOQ99835 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SMOQ99835 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.98■□□□□ 0.79
SMOQ99835 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMOQ99835 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.98■□□□□ 0.79
SMOQ99835 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMOQ99835 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMOQ99835 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMOQ99835 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.97■□□□□ 0.79
SMOQ99835 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMOQ99835 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMOQ99835 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMOQ99835 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.97■□□□□ 0.79
SMOQ99835 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMOQ99835 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.97■□□□□ 0.79
SMOQ99835 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.97■□□□□ 0.79
SMOQ99835 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.97■□□□□ 0.79
SMOQ99835 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.97■□□□□ 0.79
SMOQ99835 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SMOQ99835 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMOQ99835 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.97■□□□□ 0.79
SMOQ99835 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SMOQ99835 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SMOQ99835 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SMOQ99835 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMOQ99835 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMOQ99835 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMOQ99835 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMOQ99835 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMOQ99835 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.96■□□□□ 0.79
SMOQ99835 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.96■□□□□ 0.79
SMOQ99835 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.96■□□□□ 0.79
SMOQ99835 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SMOQ99835 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.96■□□□□ 0.79
SMOQ99835 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMOQ99835 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMOQ99835 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMOQ99835 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SMOQ99835 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
SMOQ99835 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMOQ99835 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMOQ99835 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMOQ99835 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SMOQ99835 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMOQ99835 KRT8P45-201ENST00000414328 1447 ntBASIC19.95■□□□□ 0.78
SMOQ99835 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SMOQ99835 TMPOP1-202ENST00000424642 1267 ntBASIC19.95■□□□□ 0.78
SMOQ99835 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.95■□□□□ 0.78
SMOQ99835 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.95■□□□□ 0.78
SMOQ99835 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
SMOQ99835 AL138966.2-201ENST00000621997 464 ntBASIC19.95■□□□□ 0.78
SMOQ99835 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SMOQ99835 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMOQ99835 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMOQ99835 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.95■□□□□ 0.78
SMOQ99835 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMOQ99835 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMOQ99835 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMOQ99835 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMOQ99835 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMOQ99835 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMOQ99835 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SMOQ99835 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMOQ99835 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.94■□□□□ 0.78
SMOQ99835 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.94■□□□□ 0.78
SMOQ99835 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.94■□□□□ 0.78
SMOQ99835 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.94■□□□□ 0.78
SMOQ99835 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.94■□□□□ 0.78
SMOQ99835 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.94■□□□□ 0.78
SMOQ99835 GPAT2P1-201ENST00000444924 1672 ntBASIC19.94■□□□□ 0.78
SMOQ99835 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SMOQ99835 AL161938.1-201ENST00000569833 2180 ntBASIC19.94■□□□□ 0.78
SMOQ99835 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SMOQ99835 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SMOQ99835 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.94■□□□□ 0.78
SMOQ99835 LIN28AP1-201ENST00000429574 405 ntBASIC19.94■□□□□ 0.78
SMOQ99835 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.94■□□□□ 0.78
SMOQ99835 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.94■□□□□ 0.78
SMOQ99835 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.94■□□□□ 0.78
SMOQ99835 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.94■□□□□ 0.78
SMOQ99835 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.94■□□□□ 0.78
SMOQ99835 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.94■□□□□ 0.78
SMOQ99835 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms