Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ABCA3Q99758 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC25.4■■□□□ 1.66
ABCA3Q99758 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
ABCA3Q99758 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.66
ABCA3Q99758 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC25.39■■□□□ 1.66
ABCA3Q99758 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.39■■□□□ 1.66
ABCA3Q99758 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
ABCA3Q99758 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC25.39■■□□□ 1.66
ABCA3Q99758 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ABCA3Q99758 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ABCA3Q99758 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ABCA3Q99758 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ABCA3Q99758 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
ABCA3Q99758 AL590627.1-203ENST00000421194 1026 ntBASIC25.39■■□□□ 1.65
ABCA3Q99758 KRT18P23-201ENST00000435622 1283 ntBASIC25.39■■□□□ 1.65
ABCA3Q99758 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
ABCA3Q99758 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.65
ABCA3Q99758 Z69720.1-201ENST00000601483 472 ntBASIC25.39■■□□□ 1.65
ABCA3Q99758 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
ABCA3Q99758 AF228730.7-201ENST00000641842 219 ntBASIC25.39■■□□□ 1.65
ABCA3Q99758 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
ABCA3Q99758 HOXB1-202ENST00000577092 1414 ntBASIC25.39■■□□□ 1.65
ABCA3Q99758 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC25.39■■□□□ 1.65
ABCA3Q99758 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
ABCA3Q99758 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC25.39■■□□□ 1.65
ABCA3Q99758 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ABCA3Q99758 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
ABCA3Q99758 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC25.38■■□□□ 1.65
ABCA3Q99758 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ABCA3Q99758 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ABCA3Q99758 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ABCA3Q99758 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ABCA3Q99758 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC25.37■■□□□ 1.65
ABCA3Q99758 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
ABCA3Q99758 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCA3Q99758 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
ABCA3Q99758 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC25.37■■□□□ 1.65
ABCA3Q99758 AC020907.5-201ENST00000624372 1936 ntBASIC25.37■■□□□ 1.65
ABCA3Q99758 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC25.37■■□□□ 1.65
ABCA3Q99758 SDHAP1-207ENST00000440850 2000 ntBASIC25.37■■□□□ 1.65
ABCA3Q99758 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCA3Q99758 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
ABCA3Q99758 AC018712.1-201ENST00000455767 687 ntBASIC25.37■■□□□ 1.65
ABCA3Q99758 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCA3Q99758 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ABCA3Q99758 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
ABCA3Q99758 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ABCA3Q99758 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ABCA3Q99758 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC25.36■■□□□ 1.65
ABCA3Q99758 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC25.36■■□□□ 1.65
ABCA3Q99758 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
ABCA3Q99758 ABBA01031661.1-201ENST00000634362 1253 ntBASIC25.36■■□□□ 1.65
ABCA3Q99758 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ABCA3Q99758 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC25.36■■□□□ 1.65
ABCA3Q99758 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
ABCA3Q99758 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
ABCA3Q99758 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ABCA3Q99758 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ABCA3Q99758 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ABCA3Q99758 LSM5-204ENST00000409909 740 ntTSL 2 BASIC25.35■■□□□ 1.65
ABCA3Q99758 FICD-205ENST00000552758 603 ntTSL 2 BASIC25.35■■□□□ 1.65
ABCA3Q99758 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
ABCA3Q99758 AC117500.6-201ENST00000624871 588 ntBASIC25.35■■□□□ 1.65
ABCA3Q99758 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
ABCA3Q99758 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ABCA3Q99758 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ABCA3Q99758 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ABCA3Q99758 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
ABCA3Q99758 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC25.35■■□□□ 1.65
ABCA3Q99758 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ABCA3Q99758 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC25.35■■□□□ 1.65
ABCA3Q99758 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ABCA3Q99758 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ABCA3Q99758 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC25.34■■□□□ 1.65
ABCA3Q99758 ELP6-205ENST00000439305 880 ntTSL 2 BASIC25.34■■□□□ 1.65
ABCA3Q99758 AC104390.1-201ENST00000555663 520 ntBASIC25.34■■□□□ 1.65
ABCA3Q99758 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC25.34■■□□□ 1.65
ABCA3Q99758 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ABCA3Q99758 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC25.34■■□□□ 1.65
ABCA3Q99758 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC25.34■■□□□ 1.65
ABCA3Q99758 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.34■■□□□ 1.65
ABCA3Q99758 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ABCA3Q99758 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC25.34■■□□□ 1.65
ABCA3Q99758 DET1-207ENST00000564406 2315 ntTSL 2 BASIC25.34■■□□□ 1.65
ABCA3Q99758 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.34■■□□□ 1.65
ABCA3Q99758 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
ABCA3Q99758 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC25.34■■□□□ 1.65
ABCA3Q99758 ABR-217ENST00000572441 563 ntTSL 4 BASIC25.34■■□□□ 1.65
ABCA3Q99758 AC090616.6-201ENST00000582640 721 ntBASIC25.34■■□□□ 1.65
ABCA3Q99758 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
ABCA3Q99758 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
ABCA3Q99758 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
ABCA3Q99758 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ABCA3Q99758 KRT8P3-201ENST00000519669 1449 ntBASIC25.34■■□□□ 1.65
ABCA3Q99758 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ABCA3Q99758 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ABCA3Q99758 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
ABCA3Q99758 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ABCA3Q99758 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ABCA3Q99758 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms