Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.45■□□□□ 0.54
SLC38A3Q99624 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 AC092647.4-201ENST00000457211 535 ntBASIC18.45■□□□□ 0.54
SLC38A3Q99624 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 AC063952.2-201ENST00000498792 1227 ntBASIC18.45■□□□□ 0.54
SLC38A3Q99624 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 AC022616.7-201ENST00000525383 220 ntBASIC18.45■□□□□ 0.54
SLC38A3Q99624 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC38A3Q99624 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC38A3Q99624 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC38A3Q99624 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC38A3Q99624 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC38A3Q99624 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC38A3Q99624 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC38A3Q99624 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC38A3Q99624 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC38A3Q99624 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SLC38A3Q99624 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC38A3Q99624 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC38A3Q99624 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.44■□□□□ 0.54
SLC38A3Q99624 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC38A3Q99624 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC38A3Q99624 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC38A3Q99624 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SLC38A3Q99624 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.44■□□□□ 0.54
SLC38A3Q99624 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC38A3Q99624 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC38A3Q99624 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC38A3Q99624 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC38A3Q99624 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 KRT8P45-201ENST00000414328 1447 ntBASIC18.43■□□□□ 0.54
SLC38A3Q99624 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 TSPY5P-201ENST00000426936 936 ntBASIC18.43■□□□□ 0.54
SLC38A3Q99624 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC38A3Q99624 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC38A3Q99624 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC38A3Q99624 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
SLC38A3Q99624 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SLC38A3Q99624 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC38A3Q99624 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms