Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.72■□□□□ 0.11
S1PR3Q99500 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
S1PR3Q99500 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.72■□□□□ 0.11
S1PR3Q99500 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
S1PR3Q99500 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
S1PR3Q99500 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
S1PR3Q99500 PKD1P1-201ENST00000458669 6805 ntBASIC15.71■□□□□ 0.11
S1PR3Q99500 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
S1PR3Q99500 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
S1PR3Q99500 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.71■□□□□ 0.11
S1PR3Q99500 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
S1PR3Q99500 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
S1PR3Q99500 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
S1PR3Q99500 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
S1PR3Q99500 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
S1PR3Q99500 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
S1PR3Q99500 KRT18P29-201ENST00000397031 1267 ntBASIC15.71■□□□□ 0.11
S1PR3Q99500 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
S1PR3Q99500 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.71■□□□□ 0.11
S1PR3Q99500 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
S1PR3Q99500 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.71■□□□□ 0.11
S1PR3Q99500 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.71■□□□□ 0.11
S1PR3Q99500 MTDHP1-201ENST00000605323 784 ntBASIC15.71■□□□□ 0.11
S1PR3Q99500 ITM2C-210ENST00000620962 501 ntBASIC15.71■□□□□ 0.11
S1PR3Q99500 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
S1PR3Q99500 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
S1PR3Q99500 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
S1PR3Q99500 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
S1PR3Q99500 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
S1PR3Q99500 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
S1PR3Q99500 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.71■□□□□ 0.11
S1PR3Q99500 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
S1PR3Q99500 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.71■□□□□ 0.1
S1PR3Q99500 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
S1PR3Q99500 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
S1PR3Q99500 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
S1PR3Q99500 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
S1PR3Q99500 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.7■□□□□ 0.1
S1PR3Q99500 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.7■□□□□ 0.1
S1PR3Q99500 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.7■□□□□ 0.1
S1PR3Q99500 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.7■□□□□ 0.1
S1PR3Q99500 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
S1PR3Q99500 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
S1PR3Q99500 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
S1PR3Q99500 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.7■□□□□ 0.1
S1PR3Q99500 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
S1PR3Q99500 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.7■□□□□ 0.1
S1PR3Q99500 SDHAP1-207ENST00000440850 2000 ntBASIC15.7■□□□□ 0.1
S1PR3Q99500 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
S1PR3Q99500 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
S1PR3Q99500 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.7■□□□□ 0.1
S1PR3Q99500 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.7■□□□□ 0.1
S1PR3Q99500 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
S1PR3Q99500 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.7■□□□□ 0.1
S1PR3Q99500 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
S1PR3Q99500 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
S1PR3Q99500 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
S1PR3Q99500 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.69■□□□□ 0.1
S1PR3Q99500 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
S1PR3Q99500 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
S1PR3Q99500 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
S1PR3Q99500 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
S1PR3Q99500 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.69■□□□□ 0.1
S1PR3Q99500 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
S1PR3Q99500 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
S1PR3Q99500 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
S1PR3Q99500 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
S1PR3Q99500 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.69■□□□□ 0.1
S1PR3Q99500 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.69■□□□□ 0.1
S1PR3Q99500 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.69■□□□□ 0.1
S1PR3Q99500 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.69■□□□□ 0.1
S1PR3Q99500 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.69■□□□□ 0.1
S1PR3Q99500 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.69■□□□□ 0.1
S1PR3Q99500 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.69■□□□□ 0.1
S1PR3Q99500 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.69■□□□□ 0.1
S1PR3Q99500 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
S1PR3Q99500 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
S1PR3Q99500 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
S1PR3Q99500 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.69■□□□□ 0.1
S1PR3Q99500 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
S1PR3Q99500 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
S1PR3Q99500 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
S1PR3Q99500 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.69■□□□□ 0.1
S1PR3Q99500 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
S1PR3Q99500 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
S1PR3Q99500 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms