Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH4Q99466 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH4Q99466 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH4Q99466 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 AL121672.3-201ENST00000608644 468 ntBASIC19.63■□□□□ 0.73
NOTCH4Q99466 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 AC246785.2-201ENST00000432512 513 ntBASIC19.63■□□□□ 0.73
NOTCH4Q99466 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 MIR3652-201ENST00000579335 131 ntBASIC19.63■□□□□ 0.73
NOTCH4Q99466 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.63■□□□□ 0.73
NOTCH4Q99466 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH4Q99466 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NOTCH4Q99466 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NOTCH4Q99466 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
NOTCH4Q99466 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.62■□□□□ 0.73
NOTCH4Q99466 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.62■□□□□ 0.73
NOTCH4Q99466 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NOTCH4Q99466 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.62■□□□□ 0.73
NOTCH4Q99466 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.62■□□□□ 0.73
NOTCH4Q99466 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NOTCH4Q99466 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NOTCH4Q99466 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NOTCH4Q99466 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 AL162741.1-201ENST00000565563 1558 ntBASIC19.61■□□□□ 0.73
NOTCH4Q99466 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 RNF126P1-202ENST00000569893 925 ntBASIC19.61■□□□□ 0.73
NOTCH4Q99466 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 MCCD1P1-208ENST00000445732 328 ntBASIC19.61■□□□□ 0.73
NOTCH4Q99466 BX276092.5-203ENST00000456199 560 ntBASIC19.61■□□□□ 0.73
NOTCH4Q99466 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.61■□□□□ 0.73
NOTCH4Q99466 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH4Q99466 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NOTCH4Q99466 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NOTCH4Q99466 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NOTCH4Q99466 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.6■□□□□ 0.73
NOTCH4Q99466 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NOTCH4Q99466 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.6■□□□□ 0.73
NOTCH4Q99466 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.6■□□□□ 0.73
NOTCH4Q99466 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NOTCH4Q99466 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NOTCH4Q99466 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.6■□□□□ 0.73
NOTCH4Q99466 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NOTCH4Q99466 UNC93B7-201ENST00000509439 705 ntBASIC19.6■□□□□ 0.73
NOTCH4Q99466 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NOTCH4Q99466 MIR3917-201ENST00000580971 93 ntBASIC19.6■□□□□ 0.73
NOTCH4Q99466 AL732292.2-201ENST00000609649 430 ntBASIC19.6■□□□□ 0.73
NOTCH4Q99466 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.6■□□□□ 0.73
NOTCH4Q99466 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.6■□□□□ 0.73
NOTCH4Q99466 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms