Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHOX2BQ99453 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHOX2BQ99453 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHOX2BQ99453 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PHOX2BQ99453 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 AL353801.3-201ENST00000609898 542 ntBASIC19.23■□□□□ 0.67
PHOX2BQ99453 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHOX2BQ99453 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHOX2BQ99453 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHOX2BQ99453 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
PHOX2BQ99453 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.22■□□□□ 0.67
PHOX2BQ99453 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.22■□□□□ 0.67
PHOX2BQ99453 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHOX2BQ99453 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PHOX2BQ99453 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHOX2BQ99453 AKR1C7P-201ENST00000305623 895 ntBASIC19.22■□□□□ 0.67
PHOX2BQ99453 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PHOX2BQ99453 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.22■□□□□ 0.67
PHOX2BQ99453 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PHOX2BQ99453 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.22■□□□□ 0.67
PHOX2BQ99453 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.22■□□□□ 0.67
PHOX2BQ99453 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PHOX2BQ99453 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.22■□□□□ 0.67
PHOX2BQ99453 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.22■□□□□ 0.67
PHOX2BQ99453 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.22■□□□□ 0.67
PHOX2BQ99453 AC106730.1-201ENST00000566722 1090 ntBASIC19.22■□□□□ 0.67
PHOX2BQ99453 AC138894.3-201ENST00000603787 634 ntBASIC19.22■□□□□ 0.67
PHOX2BQ99453 KRT8P20-201ENST00000423953 1409 ntBASIC19.22■□□□□ 0.67
PHOX2BQ99453 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PHOX2BQ99453 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHOX2BQ99453 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHOX2BQ99453 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.22■□□□□ 0.67
PHOX2BQ99453 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHOX2BQ99453 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHOX2BQ99453 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHOX2BQ99453 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHOX2BQ99453 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHOX2BQ99453 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PHOX2BQ99453 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHOX2BQ99453 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHOX2BQ99453 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 MIR3197-201ENST00000582241 73 ntBASIC19.21■□□□□ 0.67
PHOX2BQ99453 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PHOX2BQ99453 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PHOX2BQ99453 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.2■□□□□ 0.66
PHOX2BQ99453 LINC01521-201ENST00000504184 1943 ntBASIC19.2■□□□□ 0.66
PHOX2BQ99453 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PHOX2BQ99453 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.2■□□□□ 0.66
PHOX2BQ99453 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.2■□□□□ 0.66
PHOX2BQ99453 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.2■□□□□ 0.66
PHOX2BQ99453 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.2■□□□□ 0.66
PHOX2BQ99453 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.2■□□□□ 0.66
PHOX2BQ99453 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PHOX2BQ99453 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 TP73-AS1-207ENST00000624167 988 ntBASIC19.2■□□□□ 0.66
PHOX2BQ99453 AL157384.1-201ENST00000445995 2473 ntBASIC19.2■□□□□ 0.66
PHOX2BQ99453 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.2■□□□□ 0.66
PHOX2BQ99453 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.2■□□□□ 0.66
PHOX2BQ99453 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHOX2BQ99453 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
PHOX2BQ99453 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PHOX2BQ99453 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms