Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 AC141586.3-201ENST00000562166 1838 ntBASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP1Q96SZ6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 AP000523.1-201ENST00000398242 1049 ntBASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 AL138966.2-201ENST00000621997 464 ntBASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 FEM1AP3-201ENST00000403722 1741 ntBASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CDK5RAP1Q96SZ6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.74■□□□□ 0.75
CDK5RAP1Q96SZ6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CDK5RAP1Q96SZ6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDK5RAP1Q96SZ6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP1Q96SZ6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP1Q96SZ6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CDK5RAP1Q96SZ6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CDK5RAP1Q96SZ6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.74■□□□□ 0.75
CDK5RAP1Q96SZ6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP1Q96SZ6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDK5RAP1Q96SZ6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.74■□□□□ 0.75
CDK5RAP1Q96SZ6 AL031432.5-201ENST00000641059 760 ntBASIC19.74■□□□□ 0.75
CDK5RAP1Q96SZ6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK5RAP1Q96SZ6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP1Q96SZ6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms