Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.31■□□□□ 0.84
CASD1Q96PB1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CASD1Q96PB1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.31■□□□□ 0.84
CASD1Q96PB1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.31■□□□□ 0.84
CASD1Q96PB1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.31■□□□□ 0.84
CASD1Q96PB1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.31■□□□□ 0.84
CASD1Q96PB1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CASD1Q96PB1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CASD1Q96PB1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.3■□□□□ 0.84
CASD1Q96PB1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.3■□□□□ 0.84
CASD1Q96PB1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.3■□□□□ 0.84
CASD1Q96PB1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.3■□□□□ 0.84
CASD1Q96PB1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.3■□□□□ 0.84
CASD1Q96PB1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.3■□□□□ 0.84
CASD1Q96PB1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CASD1Q96PB1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.3■□□□□ 0.84
CASD1Q96PB1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASD1Q96PB1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CASD1Q96PB1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASD1Q96PB1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASD1Q96PB1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.29■□□□□ 0.84
CASD1Q96PB1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASD1Q96PB1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASD1Q96PB1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASD1Q96PB1 TPM4P1-201ENST00000436100 807 ntBASIC20.29■□□□□ 0.84
CASD1Q96PB1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.29■□□□□ 0.84
CASD1Q96PB1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CASD1Q96PB1 AC011498.5-201ENST00000592027 486 ntBASIC20.29■□□□□ 0.84
CASD1Q96PB1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.29■□□□□ 0.84
CASD1Q96PB1 AC112497.1-201ENST00000624824 639 ntBASIC20.29■□□□□ 0.84
CASD1Q96PB1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.29■□□□□ 0.84
CASD1Q96PB1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.29■□□□□ 0.84
CASD1Q96PB1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASD1Q96PB1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASD1Q96PB1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASD1Q96PB1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CASD1Q96PB1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASD1Q96PB1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASD1Q96PB1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASD1Q96PB1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CASD1Q96PB1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.29■□□□□ 0.84
CASD1Q96PB1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASD1Q96PB1 TREX1-205ENST00000625293 1783 ntBASIC20.29■□□□□ 0.84
CASD1Q96PB1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASD1Q96PB1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CASD1Q96PB1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASD1Q96PB1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CASD1Q96PB1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASD1Q96PB1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASD1Q96PB1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 AL157888.1-201ENST00000631930 593 ntBASIC20.28■□□□□ 0.84
CASD1Q96PB1 AC016734.2-201ENST00000624325 1377 ntBASIC20.28■□□□□ 0.84
CASD1Q96PB1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASD1Q96PB1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CASD1Q96PB1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASD1Q96PB1 Z82202.1-201ENST00000623446 1880 ntBASIC20.28■□□□□ 0.84
CASD1Q96PB1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASD1Q96PB1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CASD1Q96PB1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms