Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 SLC25A1P2-201ENST00000430693 912 ntBASIC19.62■□□□□ 0.73
RPRD1AQ96P16 CCR12P-201ENST00000446203 998 ntBASIC19.62■□□□□ 0.73
RPRD1AQ96P16 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 AC012306.2-201ENST00000609350 630 ntBASIC19.62■□□□□ 0.73
RPRD1AQ96P16 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPRD1AQ96P16 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 AC005332.7-201ENST00000614046 2005 ntBASIC19.61■□□□□ 0.73
RPRD1AQ96P16 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 KRT18P22-201ENST00000402024 1347 ntBASIC19.61■□□□□ 0.73
RPRD1AQ96P16 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 AC128688.1-201ENST00000487626 519 ntBASIC19.61■□□□□ 0.73
RPRD1AQ96P16 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 AC116562.4-202ENST00000641738 218 ntBASIC19.61■□□□□ 0.73
RPRD1AQ96P16 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPRD1AQ96P16 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 CA15P1-201ENST00000481698 905 ntBASIC19.6■□□□□ 0.73
RPRD1AQ96P16 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.6■□□□□ 0.73
RPRD1AQ96P16 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPRD1AQ96P16 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 IRX1P1-201ENST00000438849 1838 ntBASIC19.59■□□□□ 0.73
RPRD1AQ96P16 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms