Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 ATP5G2P1-201ENST00000433580 426 ntBASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 LINC01311-201ENST00000565162 1445 ntBASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC46A1Q96NT5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 GCSHP2-201ENST00000560971 527 ntBASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC46A1Q96NT5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC46A1Q96NT5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC46A1Q96NT5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms