Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 AL354751.1-201ENST00000412768 1863 ntBASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PKNOX2Q96KN3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKNOX2Q96KN3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PKNOX2Q96KN3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 AC011298.3-201ENST00000615796 283 ntBASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKNOX2Q96KN3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms