Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ANO7L1-203ENST00000602586 1720 ntBASIC19.44■□□□□ 0.7
RTP4Q96DX8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTP4Q96DX8 NEFHP1-201ENST00000412845 2629 ntBASIC19.44■□□□□ 0.7
RTP4Q96DX8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTP4Q96DX8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.44■□□□□ 0.7
RTP4Q96DX8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RTP4Q96DX8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTP4Q96DX8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTP4Q96DX8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTP4Q96DX8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTP4Q96DX8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.44■□□□□ 0.7
RTP4Q96DX8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTP4Q96DX8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.43■□□□□ 0.7
RTP4Q96DX8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
RTP4Q96DX8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTP4Q96DX8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTP4Q96DX8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.43■□□□□ 0.7
RTP4Q96DX8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.43■□□□□ 0.7
RTP4Q96DX8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTP4Q96DX8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.43■□□□□ 0.7
RTP4Q96DX8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTP4Q96DX8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTP4Q96DX8 NIFKP9-201ENST00000419265 221 ntBASIC19.43■□□□□ 0.7
RTP4Q96DX8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.43■□□□□ 0.7
RTP4Q96DX8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.43■□□□□ 0.7
RTP4Q96DX8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.43■□□□□ 0.7
RTP4Q96DX8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.43■□□□□ 0.7
RTP4Q96DX8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.43■□□□□ 0.7
RTP4Q96DX8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.43■□□□□ 0.7
RTP4Q96DX8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTP4Q96DX8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.42■□□□□ 0.7
RTP4Q96DX8 MIR718-201ENST00000390190 70 ntBASIC19.42■□□□□ 0.7
RTP4Q96DX8 AC004980.1-204ENST00000429707 299 ntBASIC19.42■□□□□ 0.7
RTP4Q96DX8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTP4Q96DX8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.42■□□□□ 0.7
RTP4Q96DX8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTP4Q96DX8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.42■□□□□ 0.7
RTP4Q96DX8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTP4Q96DX8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
RTP4Q96DX8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.42■□□□□ 0.7
RTP4Q96DX8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTP4Q96DX8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTP4Q96DX8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTP4Q96DX8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.42■□□□□ 0.7
RTP4Q96DX8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTP4Q96DX8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 KRT8P11-201ENST00000409686 1436 ntBASIC19.41■□□□□ 0.7
RTP4Q96DX8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTP4Q96DX8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.41■□□□□ 0.7
RTP4Q96DX8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTP4Q96DX8 AC090164.3-201ENST00000610780 2143 ntBASIC19.4■□□□□ 0.7
RTP4Q96DX8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.4■□□□□ 0.7
RTP4Q96DX8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.4■□□□□ 0.7
RTP4Q96DX8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.4■□□□□ 0.7
RTP4Q96DX8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTP4Q96DX8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.4■□□□□ 0.7
RTP4Q96DX8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.4■□□□□ 0.7
RTP4Q96DX8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTP4Q96DX8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTP4Q96DX8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTP4Q96DX8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTP4Q96DX8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.4■□□□□ 0.7
RTP4Q96DX8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms