Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 AC104417.2-201ENST00000562989 1793 ntBASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 KRT8P10-201ENST00000450021 1447 ntBASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 AP002414.4-201ENST00000589764 1148 ntBASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SNRNP40Q96DI7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 PVRIG2P-201ENST00000435460 978 ntBASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 NUS1P1-201ENST00000446295 882 ntBASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 KRT8P26-201ENST00000534154 1276 ntBASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.1■□□□□ 0.33
SNRNP40Q96DI7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 AL512408.1-201ENST00000569378 2000 ntBASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 AP000347.1-202ENST00000435868 847 ntBASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 AC036111.1-201ENST00000533973 1582 ntBASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 AL162741.1-201ENST00000565563 1558 ntBASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNRNP40Q96DI7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.08■□□□□ 0.33
SNRNP40Q96DI7 AL391422.3-201ENST00000603791 2761 ntBASIC17.08■□□□□ 0.33
SNRNP40Q96DI7 AC073314.1-201ENST00000568729 2216 ntBASIC17.08■□□□□ 0.33
SNRNP40Q96DI7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNRNP40Q96DI7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms