Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC28Q96AY4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
TTC28Q96AY4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TTC28Q96AY4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TTC28Q96AY4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 MCCD1P2-201ENST00000423228 335 ntBASIC19.36■□□□□ 0.69
TTC28Q96AY4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TTC28Q96AY4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TTC28Q96AY4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TTC28Q96AY4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 RBM17P3-201ENST00000417687 1192 ntBASIC19.36■□□□□ 0.69
TTC28Q96AY4 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.36■□□□□ 0.69
TTC28Q96AY4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 AC005225.4-201ENST00000557330 545 ntBASIC19.36■□□□□ 0.69
TTC28Q96AY4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 AC138761.1-201ENST00000584393 385 ntBASIC19.36■□□□□ 0.69
TTC28Q96AY4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 AC008608.2-201ENST00000606089 416 ntBASIC19.36■□□□□ 0.69
TTC28Q96AY4 AC114341.1-201ENST00000618070 349 ntBASIC19.36■□□□□ 0.69
TTC28Q96AY4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
TTC28Q96AY4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TTC28Q96AY4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC28Q96AY4 C9orf163-202ENST00000624034 2573 ntBASIC19.36■□□□□ 0.69
TTC28Q96AY4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 AC132008.2-207ENST00000454517 770 ntBASIC19.35■□□□□ 0.69
TTC28Q96AY4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TTC28Q96AY4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TTC28Q96AY4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TTC28Q96AY4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TTC28Q96AY4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TTC28Q96AY4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TTC28Q96AY4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TTC28Q96AY4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.35■□□□□ 0.69
TTC28Q96AY4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TTC28Q96AY4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.34■□□□□ 0.69
TTC28Q96AY4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC28Q96AY4 AC254562.1-201ENST00000417586 456 ntBASIC19.34■□□□□ 0.69
TTC28Q96AY4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.34■□□□□ 0.69
TTC28Q96AY4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.34■□□□□ 0.69
TTC28Q96AY4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.34■□□□□ 0.69
TTC28Q96AY4 YBX1P5-201ENST00000509441 847 ntBASIC19.34■□□□□ 0.69
TTC28Q96AY4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC28Q96AY4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC28Q96AY4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC28Q96AY4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.34■□□□□ 0.69
TTC28Q96AY4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TTC28Q96AY4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.34■□□□□ 0.69
TTC28Q96AY4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC28Q96AY4 MINOS1P3-201ENST00000457048 203 ntBASIC19.34■□□□□ 0.69
TTC28Q96AY4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.34■□□□□ 0.69
TTC28Q96AY4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.34■□□□□ 0.69
TTC28Q96AY4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC28Q96AY4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC28Q96AY4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.34■□□□□ 0.69
TTC28Q96AY4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TTC28Q96AY4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TTC28Q96AY4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC28Q96AY4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC28Q96AY4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC28Q96AY4 POM121L3P-201ENST00000419331 1163 ntBASIC19.33■□□□□ 0.69
TTC28Q96AY4 MEIS3P1-201ENST00000495167 958 ntBASIC19.33■□□□□ 0.69
TTC28Q96AY4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.69
TTC28Q96AY4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.69
TTC28Q96AY4 Z83851.2-201ENST00000609564 659 ntBASIC19.33■□□□□ 0.69
TTC28Q96AY4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TTC28Q96AY4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TTC28Q96AY4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC28Q96AY4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TTC28Q96AY4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TTC28Q96AY4 PHGDH-210ENST00000641115 1638 ntBASIC19.33■□□□□ 0.68
TTC28Q96AY4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TTC28Q96AY4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TTC28Q96AY4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
TTC28Q96AY4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TTC28Q96AY4 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.33■□□□□ 0.68
TTC28Q96AY4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TTC28Q96AY4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.33■□□□□ 0.68
TTC28Q96AY4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.33■□□□□ 0.68
TTC28Q96AY4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TTC28Q96AY4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.33■□□□□ 0.68
TTC28Q96AY4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.33■□□□□ 0.68
TTC28Q96AY4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms