Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.96■□□□□ 0.47
TM9SF4Q92544 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.96■□□□□ 0.47
TM9SF4Q92544 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
TM9SF4Q92544 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.96■□□□□ 0.46
TM9SF4Q92544 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF4Q92544 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF4Q92544 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF4Q92544 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF4Q92544 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF4Q92544 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 AC004951.3-201ENST00000418645 1148 ntBASIC17.95■□□□□ 0.46
TM9SF4Q92544 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 CCR12P-201ENST00000446203 998 ntBASIC17.95■□□□□ 0.46
TM9SF4Q92544 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 AC011506.1-201ENST00000474329 610 ntBASIC17.95■□□□□ 0.46
TM9SF4Q92544 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF4Q92544 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 AP000692.2-201ENST00000608391 879 ntBASIC17.95■□□□□ 0.46
TM9SF4Q92544 AC011298.2-201ENST00000617989 482 ntBASIC17.95■□□□□ 0.46
TM9SF4Q92544 AC116562.4-202ENST00000641738 218 ntBASIC17.95■□□□□ 0.46
TM9SF4Q92544 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF4Q92544 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF4Q92544 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF4Q92544 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF4Q92544 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF4Q92544 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TM9SF4Q92544 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.94■□□□□ 0.46
TM9SF4Q92544 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.94■□□□□ 0.46
TM9SF4Q92544 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TM9SF4Q92544 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
TM9SF4Q92544 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TM9SF4Q92544 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
TM9SF4Q92544 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.94■□□□□ 0.46
TM9SF4Q92544 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.94■□□□□ 0.46
TM9SF4Q92544 BX664615.1-201ENST00000443558 458 ntBASIC17.94■□□□□ 0.46
TM9SF4Q92544 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.94■□□□□ 0.46
TM9SF4Q92544 AC130371.2-201ENST00000619443 611 ntBASIC17.94■□□□□ 0.46
TM9SF4Q92544 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.94■□□□□ 0.46
TM9SF4Q92544 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.94■□□□□ 0.46
TM9SF4Q92544 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.94■□□□□ 0.46
TM9SF4Q92544 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF4Q92544 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 HMGA1P5-201ENST00000412453 271 ntBASIC17.93■□□□□ 0.46
TM9SF4Q92544 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 ECEL1P2-202ENST00000465689 757 ntBASIC17.93■□□□□ 0.46
TM9SF4Q92544 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 AC010203.1-204ENST00000548782 407 ntBASIC17.93■□□□□ 0.46
TM9SF4Q92544 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM9SF4Q92544 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
TM9SF4Q92544 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM9SF4Q92544 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms