Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 NOC2LP2-201ENST00000407594 1944 ntBASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 AC006970.2-201ENST00000450065 779 ntBASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC44A1Q8WWI5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.08■□□□□ 0.65
SLC44A1Q8WWI5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SLC44A1Q8WWI5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC44A1Q8WWI5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC44A1Q8WWI5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC44A1Q8WWI5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SLC44A1Q8WWI5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC44A1Q8WWI5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC44A1Q8WWI5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC44A1Q8WWI5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 TSPY6P-201ENST00000448518 926 ntBASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 AC073592.3-201ENST00000625118 1834 ntBASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC44A1Q8WWI5 AC020763.4-201ENST00000623414 4170 ntBASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 SLC29A4P1-201ENST00000398760 971 ntBASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC44A1Q8WWI5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC44A1Q8WWI5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms