Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RASA4DP-201ENST00000460726 1199 ntBASIC19.08■□□□□ 0.64
HMGB4Q8WW32 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 AC034232.1-201ENST00000506026 1064 ntBASIC19.08■□□□□ 0.64
HMGB4Q8WW32 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 GPAT2P1-201ENST00000444924 1672 ntBASIC19.08■□□□□ 0.64
HMGB4Q8WW32 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 HBZP1-201ENST00000354915 429 ntBASIC19.07■□□□□ 0.64
HMGB4Q8WW32 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 AC026396.1-201ENST00000419388 421 ntBASIC19.07■□□□□ 0.64
HMGB4Q8WW32 AL645929.1-201ENST00000420084 975 ntBASIC19.07■□□□□ 0.64
HMGB4Q8WW32 TSPY21P-201ENST00000433481 731 ntBASIC19.07■□□□□ 0.64
HMGB4Q8WW32 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 SPDYE13P-201ENST00000445314 798 ntBASIC19.07■□□□□ 0.64
HMGB4Q8WW32 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 AC092597.1-201ENST00000487352 616 ntBASIC19.07■□□□□ 0.64
HMGB4Q8WW32 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 AC024243.1-201ENST00000609234 778 ntBASIC19.07■□□□□ 0.64
HMGB4Q8WW32 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGB4Q8WW32 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 AC036111.1-201ENST00000533973 1582 ntBASIC19.06■□□□□ 0.64
HMGB4Q8WW32 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HMGB4Q8WW32 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 ATP5G2P1-201ENST00000433580 426 ntBASIC19.05■□□□□ 0.64
HMGB4Q8WW32 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 AC092119.3-201ENST00000612618 583 ntBASIC19.05■□□□□ 0.64
HMGB4Q8WW32 AL691432.3-201ENST00000621860 400 ntBASIC19.05■□□□□ 0.64
HMGB4Q8WW32 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HMGB4Q8WW32 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms