Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 AK4P3-201ENST00000418260 669 ntBASIC26.47■■□□□ 1.83
TMC1Q8TDI8 CD70-202ENST00000423145 881 ntTSL 2 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 AC139887.4-201ENST00000607877 719 ntBASIC26.47■■□□□ 1.83
TMC1Q8TDI8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TMC1Q8TDI8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TMC1Q8TDI8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC26.46■■□□□ 1.83
TMC1Q8TDI8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC26.46■■□□□ 1.83
TMC1Q8TDI8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC26.46■■□□□ 1.83
TMC1Q8TDI8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TMC1Q8TDI8 AC117947.1-201ENST00000427448 529 ntBASIC26.46■■□□□ 1.83
TMC1Q8TDI8 CA15P1-201ENST00000481698 905 ntBASIC26.46■■□□□ 1.83
TMC1Q8TDI8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
TMC1Q8TDI8 AP003041.3-201ENST00000527151 707 ntBASIC26.46■■□□□ 1.83
TMC1Q8TDI8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC26.46■■□□□ 1.83
TMC1Q8TDI8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC26.46■■□□□ 1.83
TMC1Q8TDI8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
TMC1Q8TDI8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TMC1Q8TDI8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC26.46■■□□□ 1.83
TMC1Q8TDI8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC26.46■■□□□ 1.83
TMC1Q8TDI8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.83
TMC1Q8TDI8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 PRSS44-201ENST00000515154 1146 ntBASIC26.45■■□□□ 1.82
TMC1Q8TDI8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TMC1Q8TDI8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMC1Q8TDI8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMC1Q8TDI8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TMC1Q8TDI8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMC1Q8TDI8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
TMC1Q8TDI8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMC1Q8TDI8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
TMC1Q8TDI8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TMC1Q8TDI8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC26.44■■□□□ 1.82
TMC1Q8TDI8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
TMC1Q8TDI8 AC005332.7-201ENST00000614046 2005 ntBASIC26.44■■□□□ 1.82
TMC1Q8TDI8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
TMC1Q8TDI8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMC1Q8TDI8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 GXYLT1P6-201ENST00000456472 1187 ntBASIC26.43■■□□□ 1.82
TMC1Q8TDI8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
TMC1Q8TDI8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms