Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 AL031985.4-201ENST00000642138 673 ntBASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 FP475955.4-201ENST00000623131 1990 ntBASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 FAM197Y1-201ENST00000421178 764 ntBASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 AC093827.2-201ENST00000512654 315 ntBASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 CR392000.1-201ENST00000624770 1228 ntBASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.69■□□□□ 0.58
HMGCLL1Q8TB92 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 Z85996.1-201ENST00000494644 937 ntBASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCLL1Q8TB92 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms