Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 MESTP1-201ENST00000404287 994 ntBASIC16.66■□□□□ 0.26
CPEB3Q8NE35 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 AC004951.3-201ENST00000418645 1148 ntBASIC16.66■□□□□ 0.26
CPEB3Q8NE35 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 TSPY23P-201ENST00000440136 739 ntBASIC16.66■□□□□ 0.26
CPEB3Q8NE35 B3GAT3P1-201ENST00000471720 806 ntBASIC16.66■□□□□ 0.26
CPEB3Q8NE35 NUDT16P1-203ENST00000513809 620 ntBASIC16.66■□□□□ 0.26
CPEB3Q8NE35 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 AL161938.1-201ENST00000569833 2180 ntBASIC16.66■□□□□ 0.26
CPEB3Q8NE35 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 MIR6786-201ENST00000616843 113 ntBASIC16.66■□□□□ 0.26
CPEB3Q8NE35 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 AL049812.1-201ENST00000432563 2267 ntBASIC16.66■□□□□ 0.26
CPEB3Q8NE35 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.66■□□□□ 0.26
CPEB3Q8NE35 IRX1P1-201ENST00000438849 1838 ntBASIC16.66■□□□□ 0.26
CPEB3Q8NE35 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 TSPY7P-201ENST00000431358 1114 ntBASIC16.65■□□□□ 0.26
CPEB3Q8NE35 TSPY21P-201ENST00000433481 731 ntBASIC16.65■□□□□ 0.26
CPEB3Q8NE35 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 AC011298.2-201ENST00000617989 482 ntBASIC16.65■□□□□ 0.26
CPEB3Q8NE35 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.65■□□□□ 0.26
CPEB3Q8NE35 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPEB3Q8NE35 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 AC116562.2-201ENST00000507042 360 ntBASIC16.64■□□□□ 0.25
CPEB3Q8NE35 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 FSCN1P1-201ENST00000568912 1481 ntBASIC16.64■□□□□ 0.25
CPEB3Q8NE35 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPEB3Q8NE35 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.63■□□□□ 0.25
CPEB3Q8NE35 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms