Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 AC009947.2-201ENST00000444014 672 ntBASIC20.72■□□□□ 0.91
RNF169Q8NCN4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF169Q8NCN4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF169Q8NCN4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.7■□□□□ 0.91
RNF169Q8NCN4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 HOMER2P1-201ENST00000455653 964 ntBASIC20.7■□□□□ 0.9
RNF169Q8NCN4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.7■□□□□ 0.9
RNF169Q8NCN4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF169Q8NCN4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF169Q8NCN4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF169Q8NCN4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF169Q8NCN4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
RNF169Q8NCN4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF169Q8NCN4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF169Q8NCN4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms