Protein–RNA interactions for Protein: Q8N6F1

CLDN19, Claudin-19, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN19Q8N6F1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 AP000692.2-201ENST00000608391 879 ntBASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN19Q8N6F1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CLDN19Q8N6F1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN19Q8N6F1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN19Q8N6F1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN19Q8N6F1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN19Q8N6F1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN19Q8N6F1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CLDN19Q8N6F1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
CLDN19Q8N6F1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN19Q8N6F1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN19Q8N6F1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
CLDN19Q8N6F1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN19Q8N6F1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN19Q8N6F1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 TSPY15P-201ENST00000457163 923 ntBASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 SLC25A1P4-201ENST00000567977 778 ntBASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLDN19Q8N6F1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 KRT17P2-201ENST00000300992 1314 ntBASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 RBM17P1-201ENST00000453646 1190 ntBASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 AL355075.4-201ENST00000554988 638 ntBASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 CKBP1-201ENST00000565489 1086 ntBASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN19Q8N6F1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms