Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC128688.1-201ENST00000487626 519 ntBASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 AL353719.1-201ENST00000566847 864 ntBASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 AC092338.2-201ENST00000568827 1415 ntBASIC18.82■□□□□ 0.6
TRAM1L1Q8N609 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 KRT18P22-201ENST00000402024 1347 ntBASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 AL161938.1-201ENST00000569833 2180 ntBASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 LINC01023-201ENST00000606054 436 ntBASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 AC010653.2-201ENST00000623505 997 ntBASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAM1L1Q8N609 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 AC007663.1-201ENST00000438948 1240 ntBASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAM1L1Q8N609 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 AIRN-201ENST00000601203 4374 ntBASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAM1L1Q8N609 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms