Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.98■□□□□ 0.47
ARHGEF39Q8N4T4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 AC005521.1-201ENST00000393351 872 ntBASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 HMGA1P5-201ENST00000412453 271 ntBASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.97■□□□□ 0.47
ARHGEF39Q8N4T4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 FAM210CP-201ENST00000445714 574 ntBASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 AL138966.2-201ENST00000621997 464 ntBASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF39Q8N4T4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ARHGEF39Q8N4T4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF39Q8N4T4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms