Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 NPAP1P7-201ENST00000613027 823 ntBASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SYNPOQ8N3V7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 AL512408.1-201ENST00000569378 2000 ntBASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 CR769767.2-201ENST00000622735 460 ntBASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPOQ8N3V7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.33■□□□□ 0.69
SYNPOQ8N3V7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SYNPOQ8N3V7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SYNPOQ8N3V7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SYNPOQ8N3V7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNPOQ8N3V7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 AL645929.1-201ENST00000420084 975 ntBASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 RASA4DP-201ENST00000460726 1199 ntBASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SYNPOQ8N3V7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 SPDYE13P-201ENST00000445314 798 ntBASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
SYNPOQ8N3V7 MIR3652-201ENST00000579335 131 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms