Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CARFQ8N187 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.07■□□□□ 0.48
CARFQ8N187 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 AC087388.1-201ENST00000571370 1112 ntBASIC18.07■□□□□ 0.48
CARFQ8N187 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CARFQ8N187 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.07■□□□□ 0.48
CARFQ8N187 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 FP475955.4-201ENST00000623131 1990 ntBASIC18.07■□□□□ 0.48
CARFQ8N187 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CARFQ8N187 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.07■□□□□ 0.48
CARFQ8N187 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.07■□□□□ 0.48
CARFQ8N187 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CARFQ8N187 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.07■□□□□ 0.48
CARFQ8N187 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.06■□□□□ 0.48
CARFQ8N187 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.06■□□□□ 0.48
CARFQ8N187 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.06■□□□□ 0.48
CARFQ8N187 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.06■□□□□ 0.48
CARFQ8N187 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CARFQ8N187 AL441883.1-201ENST00000566170 1045 ntBASIC18.06■□□□□ 0.48
CARFQ8N187 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.06■□□□□ 0.48
CARFQ8N187 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.06■□□□□ 0.48
CARFQ8N187 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.06■□□□□ 0.48
CARFQ8N187 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CARFQ8N187 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 KRT8P7-201ENST00000533003 1432 ntBASIC18.06■□□□□ 0.48
CARFQ8N187 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CARFQ8N187 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.06■□□□□ 0.48
CARFQ8N187 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.05■□□□□ 0.48
CARFQ8N187 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.05■□□□□ 0.48
CARFQ8N187 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CARFQ8N187 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CARFQ8N187 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.05■□□□□ 0.48
CARFQ8N187 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 STARP1-201ENST00000397973 869 ntBASIC18.05■□□□□ 0.48
CARFQ8N187 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.05■□□□□ 0.48
CARFQ8N187 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.05■□□□□ 0.48
CARFQ8N187 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 AL023973.1-201ENST00000624619 620 ntBASIC18.05■□□□□ 0.48
CARFQ8N187 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CARFQ8N187 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.05■□□□□ 0.48
CARFQ8N187 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CARFQ8N187 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CARFQ8N187 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CARFQ8N187 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CARFQ8N187 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CARFQ8N187 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.04■□□□□ 0.48
CARFQ8N187 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CARFQ8N187 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CARFQ8N187 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.04■□□□□ 0.48
CARFQ8N187 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CARFQ8N187 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CARFQ8N187 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CARFQ8N187 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CARFQ8N187 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.04■□□□□ 0.48
CARFQ8N187 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.04■□□□□ 0.48
CARFQ8N187 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.04■□□□□ 0.48
CARFQ8N187 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CARFQ8N187 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.04■□□□□ 0.48
CARFQ8N187 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.04■□□□□ 0.48
CARFQ8N187 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms