Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC28.24■■■□□ 2.11
ABCA6Q8N139 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ABCA6Q8N139 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC28.24■■■□□ 2.11
ABCA6Q8N139 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC28.24■■■□□ 2.11
ABCA6Q8N139 PPIE-208ENST00000470213 927 ntTSL 3 BASIC28.24■■■□□ 2.11
ABCA6Q8N139 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC28.24■■■□□ 2.11
ABCA6Q8N139 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC28.24■■■□□ 2.11
ABCA6Q8N139 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC28.24■■■□□ 2.11
ABCA6Q8N139 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC28.24■■■□□ 2.11
ABCA6Q8N139 IL9RP2-201ENST00000423948 1312 ntBASIC28.24■■■□□ 2.11
ABCA6Q8N139 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC28.24■■■□□ 2.11
ABCA6Q8N139 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ABCA6Q8N139 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA6Q8N139 DET1-207ENST00000564406 2315 ntTSL 2 BASIC28.23■■■□□ 2.11
ABCA6Q8N139 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
ABCA6Q8N139 SDHAP1-207ENST00000440850 2000 ntBASIC28.23■■■□□ 2.11
ABCA6Q8N139 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
ABCA6Q8N139 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA6Q8N139 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA6Q8N139 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC28.23■■■□□ 2.11
ABCA6Q8N139 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA6Q8N139 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
ABCA6Q8N139 AP005901.3-202ENST00000581653 237 ntBASIC28.23■■■□□ 2.11
ABCA6Q8N139 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA6Q8N139 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA6Q8N139 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC28.23■■■□□ 2.11
ABCA6Q8N139 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC28.23■■■□□ 2.11
ABCA6Q8N139 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA6Q8N139 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC28.23■■■□□ 2.11
ABCA6Q8N139 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA6Q8N139 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA6Q8N139 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA6Q8N139 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA6Q8N139 GPR32P1-201ENST00000601788 811 ntBASIC28.22■■■□□ 2.11
ABCA6Q8N139 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
ABCA6Q8N139 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA6Q8N139 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA6Q8N139 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
ABCA6Q8N139 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA6Q8N139 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA6Q8N139 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA6Q8N139 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA6Q8N139 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA6Q8N139 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
ABCA6Q8N139 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA6Q8N139 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA6Q8N139 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA6Q8N139 MIR574-201ENST00000385209 96 ntBASIC28.21■■■□□ 2.11
ABCA6Q8N139 KRT18P13-201ENST00000400056 1290 ntBASIC28.21■■■□□ 2.11
ABCA6Q8N139 IGHV3-47-201ENST00000425060 335 ntBASIC28.21■■■□□ 2.11
ABCA6Q8N139 CDV3-207ENST00000508481 661 ntTSL 3 BASIC28.21■■■□□ 2.11
ABCA6Q8N139 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
ABCA6Q8N139 AC010240.3-201ENST00000607688 395 ntBASIC28.21■■■□□ 2.11
ABCA6Q8N139 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC28.21■■■□□ 2.11
ABCA6Q8N139 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA6Q8N139 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC28.21■■■□□ 2.11
ABCA6Q8N139 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
ABCA6Q8N139 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
ABCA6Q8N139 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
ABCA6Q8N139 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC28.21■■■□□ 2.11
ABCA6Q8N139 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC28.21■■■□□ 2.11
ABCA6Q8N139 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC28.21■■■□□ 2.11
ABCA6Q8N139 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA6Q8N139 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA6Q8N139 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA6Q8N139 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC28.21■■■□□ 2.11
ABCA6Q8N139 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA6Q8N139 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ABCA6Q8N139 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ABCA6Q8N139 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC28.2■■■□□ 2.1
ABCA6Q8N139 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC28.2■■■□□ 2.1
ABCA6Q8N139 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA6Q8N139 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC28.2■■■□□ 2.1
ABCA6Q8N139 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA6Q8N139 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA6Q8N139 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA6Q8N139 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC28.2■■■□□ 2.1
ABCA6Q8N139 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA6Q8N139 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
ABCA6Q8N139 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC28.19■■■□□ 2.1
ABCA6Q8N139 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC28.19■■■□□ 2.1
ABCA6Q8N139 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA6Q8N139 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
ABCA6Q8N139 AP001005.1-201ENST00000571755 1248 ntBASIC28.19■■■□□ 2.1
ABCA6Q8N139 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
ABCA6Q8N139 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA6Q8N139 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC28.19■■■□□ 2.1
ABCA6Q8N139 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA6Q8N139 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA6Q8N139 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
ABCA6Q8N139 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
ABCA6Q8N139 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC28.19■■■□□ 2.1
ABCA6Q8N139 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC28.19■■■□□ 2.1
ABCA6Q8N139 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
ABCA6Q8N139 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA6Q8N139 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
ABCA6Q8N139 AL590627.1-203ENST00000421194 1026 ntBASIC28.18■■■□□ 2.1
ABCA6Q8N139 AC091607.1-201ENST00000490318 1060 ntBASIC28.18■■■□□ 2.1
ABCA6Q8N139 AF238378.1-201ENST00000526806 358 ntBASIC28.18■■■□□ 2.1
ABCA6Q8N139 IGHV3OR16-7-201ENST00000604106 360 ntBASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms