Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 FEM1AP3-201ENST00000403722 1741 ntBASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 FITM1-202ENST00000559294 800 ntBASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC25.23■■□□□ 1.63
CCDC146Q8IYE0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 PRSS44-201ENST00000515154 1146 ntBASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC25.22■■□□□ 1.63
CCDC146Q8IYE0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC25.21■■□□□ 1.63
CCDC146Q8IYE0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
CCDC146Q8IYE0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CCDC146Q8IYE0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
CCDC146Q8IYE0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CCDC146Q8IYE0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CCDC146Q8IYE0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC25.2■■□□□ 1.62
CCDC146Q8IYE0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC25.2■■□□□ 1.62
CCDC146Q8IYE0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
CCDC146Q8IYE0 INGX-201ENST00000359239 846 ntBASIC25.2■■□□□ 1.62
CCDC146Q8IYE0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.2■■□□□ 1.62
CCDC146Q8IYE0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CCDC146Q8IYE0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
CCDC146Q8IYE0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC25.2■■□□□ 1.62
CCDC146Q8IYE0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CCDC146Q8IYE0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CCDC146Q8IYE0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 AP005242.2-201ENST00000580065 1175 ntBASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC146Q8IYE0 TBC1D3P2-202ENST00000577902 1649 ntBASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms