Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 AL390961.4-201ENST00000623958 2535 ntBASIC17.85■□□□□ 0.45
CCDC71Q8IV32 AC124283.5-201ENST00000624661 1809 ntBASIC17.85■□□□□ 0.45
CCDC71Q8IV32 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 AC133561.5-201ENST00000635547 218 ntBASIC17.85■□□□□ 0.45
CCDC71Q8IV32 AC120498.9-201ENST00000339021 3867 ntBASIC17.85■□□□□ 0.45
CCDC71Q8IV32 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71Q8IV32 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 AC018470.1-201ENST00000624790 3129 ntBASIC17.84■□□□□ 0.45
CCDC71Q8IV32 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC71Q8IV32 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC71Q8IV32 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC71Q8IV32 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC71Q8IV32 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC71Q8IV32 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC71Q8IV32 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC71Q8IV32 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
CCDC71Q8IV32 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC71Q8IV32 AL133373.2-201ENST00000623187 2828 ntBASIC17.83■□□□□ 0.45
CCDC71Q8IV32 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.45
CCDC71Q8IV32 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC71Q8IV32 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 AL355075.4-201ENST00000554988 638 ntBASIC17.83■□□□□ 0.44
CCDC71Q8IV32 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.83■□□□□ 0.44
CCDC71Q8IV32 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 TEX21P-204ENST00000641479 1693 ntBASIC17.83■□□□□ 0.44
CCDC71Q8IV32 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC71Q8IV32 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 AC087499.1-201ENST00000418141 1075 ntBASIC17.82■□□□□ 0.44
CCDC71Q8IV32 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms