Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF546Q86UE3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF546Q86UE3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
ZNF546Q86UE3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF546Q86UE3 PTBP1P-201ENST00000554374 1601 ntBASIC15.83■□□□□ 0.13
ZNF546Q86UE3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.83■□□□□ 0.13
ZNF546Q86UE3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF546Q86UE3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF546Q86UE3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
ZNF546Q86UE3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 GNAS-203ENST00000306120 1878 ntBASIC15.83■□□□□ 0.12
ZNF546Q86UE3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.83■□□□□ 0.12
ZNF546Q86UE3 PGM5P4-201ENST00000421970 445 ntBASIC15.83■□□□□ 0.12
ZNF546Q86UE3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.83■□□□□ 0.12
ZNF546Q86UE3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF546Q86UE3 AC084018.2-201ENST00000613093 2607 ntBASIC15.82■□□□□ 0.12
ZNF546Q86UE3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 AC141586.5-201ENST00000624546 2050 ntBASIC15.82■□□□□ 0.12
ZNF546Q86UE3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 AC010141.2-201ENST00000452426 721 ntBASIC15.82■□□□□ 0.12
ZNF546Q86UE3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 AC106739.1-201ENST00000617035 715 ntBASIC15.82■□□□□ 0.12
ZNF546Q86UE3 AL355001.2-201ENST00000620617 1191 ntBASIC15.82■□□□□ 0.12
ZNF546Q86UE3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 ANO7L1-203ENST00000602586 1720 ntBASIC15.82■□□□□ 0.12
ZNF546Q86UE3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 AC134043.2-201ENST00000624206 2238 ntBASIC15.82■□□□□ 0.12
ZNF546Q86UE3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF546Q86UE3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms