Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 KRT8P11-201ENST00000409686 1436 ntBASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 RASA4DP-201ENST00000460726 1199 ntBASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 FOSL1P1-201ENST00000511041 816 ntBASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 AL157888.1-201ENST00000631930 593 ntBASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC11.75□□□□□ -0.53
VPS13BQ7Z7G8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 AL160237.2-201ENST00000556165 472 ntBASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 ANKRD18DP-204ENST00000455355 1975 ntBASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 AL162741.1-201ENST00000565563 1558 ntBASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 AP000867.3-201ENST00000524675 377 ntBASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 AC012615.1-201ENST00000565797 1299 ntBASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
VPS13BQ7Z7G8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 AC036111.1-201ENST00000533973 1582 ntBASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 SEC1P-202ENST00000473944 940 ntBASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 AC243591.1-201ENST00000452967 1364 ntBASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 NUS1P1-201ENST00000446295 882 ntBASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC11.73□□□□□ -0.53
VPS13BQ7Z7G8 TSPY22P-201ENST00000427496 604 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms