Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 SLC25A1P2-201ENST00000430693 912 ntBASIC20.28■□□□□ 0.84
VSTM1Q6UX27 AC128688.1-201ENST00000487626 519 ntBASIC20.28■□□□□ 0.84
VSTM1Q6UX27 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 PRSS44-201ENST00000515154 1146 ntBASIC20.28■□□□□ 0.84
VSTM1Q6UX27 CKBP1-201ENST00000565489 1086 ntBASIC20.28■□□□□ 0.84
VSTM1Q6UX27 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
VSTM1Q6UX27 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
VSTM1Q6UX27 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VSTM1Q6UX27 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
VSTM1Q6UX27 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
VSTM1Q6UX27 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VSTM1Q6UX27 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
VSTM1Q6UX27 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
VSTM1Q6UX27 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 RCN1P1-201ENST00000400413 996 ntBASIC20.26■□□□□ 0.83
VSTM1Q6UX27 AC113347.1-201ENST00000413321 391 ntBASIC20.26■□□□□ 0.83
VSTM1Q6UX27 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 CCR12P-201ENST00000446203 998 ntBASIC20.26■□□□□ 0.83
VSTM1Q6UX27 CA15P1-201ENST00000481698 905 ntBASIC20.26■□□□□ 0.83
VSTM1Q6UX27 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 AC116562.4-202ENST00000641738 218 ntBASIC20.26■□□□□ 0.83
VSTM1Q6UX27 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.26■□□□□ 0.83
VSTM1Q6UX27 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 SLC25A3P1-201ENST00000443844 931 ntBASIC20.25■□□□□ 0.83
VSTM1Q6UX27 KRT18P21-201ENST00000515767 1272 ntBASIC20.25■□□□□ 0.83
VSTM1Q6UX27 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
VSTM1Q6UX27 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms