Protein–RNA interactions for Protein: Q68CR1

SEL1L3, Protein sel-1 homolog 3, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3Q68CR1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEL1L3Q68CR1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
SEL1L3Q68CR1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SEL1L3Q68CR1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SEL1L3Q68CR1 LINC01465-201ENST00000408887 1940 ntBASIC19.39■□□□□ 0.7
SEL1L3Q68CR1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 AC011298.2-201ENST00000617989 482 ntBASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 LINC01568-207ENST00000641790 1380 ntBASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEL1L3Q68CR1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 AC097488.1-201ENST00000507834 756 ntBASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 DGCR10-201ENST00000609839 495 ntBASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 AC130371.2-201ENST00000619443 611 ntBASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEL1L3Q68CR1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 MIR1224-201ENST00000408193 85 ntBASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SEL1L3Q68CR1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEL1L3Q68CR1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SEL1L3Q68CR1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.36■□□□□ 0.69
SEL1L3Q68CR1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEL1L3Q68CR1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SEL1L3Q68CR1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.36■□□□□ 0.69
SEL1L3Q68CR1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.36■□□□□ 0.69
SEL1L3Q68CR1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEL1L3Q68CR1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms