Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 TSPY22P-201ENST00000427496 604 ntBASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 HLA-F-220ENST00000434407 884 ntBASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 AL391422.3-201ENST00000603791 2761 ntBASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD4Q5XG99 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 PVRIG2P-201ENST00000435460 978 ntBASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 LINC01711-201ENST00000598340 967 ntBASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD4Q5XG99 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 MIR662-201ENST00000384847 95 ntBASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 LINC00265-3P-201ENST00000447588 903 ntBASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 AP000867.3-201ENST00000524675 377 ntBASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 MIR3917-201ENST00000580971 93 ntBASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 AL121772.3-201ENST00000610840 674 ntBASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 SDHAP1-207ENST00000440850 2000 ntBASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 AL391807.1-203ENST00000604392 2365 ntBASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD4Q5XG99 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 AL162377.1-201ENST00000618844 1793 ntBASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 AP000347.1-202ENST00000435868 847 ntBASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.65■□□□□ 0.58
LYSMD4Q5XG99 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms