Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 AC018553.1-201ENST00000616682 1458 ntBASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 AL161938.1-201ENST00000569833 2180 ntBASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 FAM201B-201ENST00000458407 597 ntBASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF1Q5TC12 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 AC124283.5-201ENST00000624661 1809 ntBASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 LTB4R2-202ENST00000528054 3092 ntBASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 AC006333.2-201ENST00000607957 2099 ntBASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 AC069544.1-201ENST00000609399 999 ntBASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF1Q5TC12 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 PCDHB18P-201ENST00000524813 2368 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms