Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 Z83836.1-201ENST00000624605 1642 ntBASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 AC010327.4-202ENST00000591484 748 ntBASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 AL157888.1-201ENST00000631930 593 ntBASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO4Q2I0M5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 NUS1P2-201ENST00000417358 873 ntBASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 IGHV3-47-201ENST00000425060 335 ntBASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 AL390719.2-201ENST00000606993 987 ntBASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO4Q2I0M5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 HTR5BP-201ENST00000430851 1154 ntBASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO4Q2I0M5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 AC139887.3-201ENST00000568585 713 ntBASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 AL024507.2-201ENST00000606070 2574 ntBASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
RSPO4Q2I0M5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
RSPO4Q2I0M5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RSPO4Q2I0M5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.39■□□□□ 0.54
RSPO4Q2I0M5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 RPSAP43-201ENST00000402237 625 ntBASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.39■□□□□ 0.53
RSPO4Q2I0M5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms