Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRPXP78539 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRPXP78539 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SRPXP78539 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.7■□□□□ 0.1
SRPXP78539 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.7■□□□□ 0.1
SRPXP78539 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.7■□□□□ 0.1
SRPXP78539 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRPXP78539 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SRPXP78539 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.7■□□□□ 0.1
SRPXP78539 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRPXP78539 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRPXP78539 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRPXP78539 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRPXP78539 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SRPXP78539 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRPXP78539 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRPXP78539 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.7■□□□□ 0.1
SRPXP78539 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRPXP78539 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRPXP78539 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRPXP78539 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 AL133373.2-201ENST00000623187 2828 ntBASIC15.69■□□□□ 0.1
SRPXP78539 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.69■□□□□ 0.1
SRPXP78539 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 AC073592.3-201ENST00000625118 1834 ntBASIC15.69■□□□□ 0.1
SRPXP78539 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.69■□□□□ 0.1
SRPXP78539 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SRPXP78539 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.69■□□□□ 0.1
SRPXP78539 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.69■□□□□ 0.1
SRPXP78539 AL390719.1-204ENST00000412397 1219 ntBASIC15.69■□□□□ 0.1
SRPXP78539 AL355472.2-201ENST00000422958 438 ntBASIC15.69■□□□□ 0.1
SRPXP78539 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.69■□□□□ 0.1
SRPXP78539 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.69■□□□□ 0.1
SRPXP78539 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SRPXP78539 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.69■□□□□ 0.1
SRPXP78539 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SRPXP78539 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRPXP78539 KRT8P8-201ENST00000434750 1448 ntBASIC15.68■□□□□ 0.1
SRPXP78539 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.68■□□□□ 0.1
SRPXP78539 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.68■□□□□ 0.1
SRPXP78539 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SRPXP78539 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.68■□□□□ 0.1
SRPXP78539 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SRPXP78539 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.68■□□□□ 0.1
SRPXP78539 AC068880.1-201ENST00000507289 2297 ntBASIC15.68■□□□□ 0.1
SRPXP78539 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 CYP2T1P-201ENST00000432607 1285 ntBASIC15.68■□□□□ 0.1
SRPXP78539 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.68■□□□□ 0.1
SRPXP78539 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.68■□□□□ 0.1
SRPXP78539 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SRPXP78539 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.68■□□□□ 0.1
SRPXP78539 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.68■□□□□ 0.1
SRPXP78539 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRPXP78539 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRPXP78539 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
SRPXP78539 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SRPXP78539 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRPXP78539 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SRPXP78539 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRPXP78539 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRPXP78539 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRPXP78539 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.67■□□□□ 0.1
SRPXP78539 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRPXP78539 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRPXP78539 AC073210.2-201ENST00000430369 194 ntBASIC15.67■□□□□ 0.1
SRPXP78539 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRPXP78539 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.67■□□□□ 0.1
SRPXP78539 OR10C1-204ENST00000622521 1039 ntBASIC15.67■□□□□ 0.1
SRPXP78539 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRPXP78539 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms