Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAE1P78406 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.07■□□□□ 0.48
RAE1P78406 AC008040.2-201ENST00000461049 708 ntBASIC18.07■□□□□ 0.48
RAE1P78406 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RAE1P78406 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RAE1P78406 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAE1P78406 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAE1P78406 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.07■□□□□ 0.48
RAE1P78406 RARRES2P10-201ENST00000564312 460 ntBASIC18.07■□□□□ 0.48
RAE1P78406 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.07■□□□□ 0.48
RAE1P78406 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.07■□□□□ 0.48
RAE1P78406 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAE1P78406 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAE1P78406 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAE1P78406 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAE1P78406 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAE1P78406 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.07■□□□□ 0.48
RAE1P78406 NEFHP1-201ENST00000412845 2629 ntBASIC18.07■□□□□ 0.48
RAE1P78406 WIZP1-201ENST00000531444 2299 ntBASIC18.07■□□□□ 0.48
RAE1P78406 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAE1P78406 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAE1P78406 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.07■□□□□ 0.48
RAE1P78406 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.07■□□□□ 0.48
RAE1P78406 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.07■□□□□ 0.48
RAE1P78406 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAE1P78406 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RAE1P78406 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.07■□□□□ 0.48
RAE1P78406 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.07■□□□□ 0.48
RAE1P78406 KRT16P1-201ENST00000399124 1418 ntBASIC18.06■□□□□ 0.48
RAE1P78406 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 AC120498.9-201ENST00000339021 3867 ntBASIC18.06■□□□□ 0.48
RAE1P78406 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RAE1P78406 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RAE1P78406 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.06■□□□□ 0.48
RAE1P78406 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.06■□□□□ 0.48
RAE1P78406 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.06■□□□□ 0.48
RAE1P78406 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.06■□□□□ 0.48
RAE1P78406 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.06■□□□□ 0.48
RAE1P78406 AL353807.1-201ENST00000427475 662 ntBASIC18.06■□□□□ 0.48
RAE1P78406 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.06■□□□□ 0.48
RAE1P78406 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RAE1P78406 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RAE1P78406 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.06■□□□□ 0.48
RAE1P78406 CR392000.1-201ENST00000624770 1228 ntBASIC18.06■□□□□ 0.48
RAE1P78406 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.06■□□□□ 0.48
RAE1P78406 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 AC104581.1-202ENST00000635932 2618 ntBASIC18.06■□□□□ 0.48
RAE1P78406 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAE1P78406 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RAE1P78406 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.05■□□□□ 0.48
RAE1P78406 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 KRT18P29-201ENST00000397031 1267 ntBASIC18.05■□□□□ 0.48
RAE1P78406 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RAE1P78406 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.05■□□□□ 0.48
RAE1P78406 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RAE1P78406 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 AC009113.1-201ENST00000570267 2443 ntBASIC18.05■□□□□ 0.48
RAE1P78406 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RAE1P78406 ANO7L1-203ENST00000602586 1720 ntBASIC18.05■□□□□ 0.48
RAE1P78406 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.05■□□□□ 0.48
RAE1P78406 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.05■□□□□ 0.48
RAE1P78406 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RAE1P78406 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAE1P78406 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RAE1P78406 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RAE1P78406 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.04■□□□□ 0.48
RAE1P78406 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms