Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.37■□□□□ 0.21
ABCA4P78363 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ABCA4P78363 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ABCA4P78363 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.37■□□□□ 0.21
ABCA4P78363 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.37■□□□□ 0.21
ABCA4P78363 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.37■□□□□ 0.21
ABCA4P78363 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ABCA4P78363 ZNF815P-204ENST00000434898 1737 ntBASIC16.37■□□□□ 0.21
ABCA4P78363 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ABCA4P78363 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.37■□□□□ 0.21
ABCA4P78363 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ABCA4P78363 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.37■□□□□ 0.21
ABCA4P78363 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ABCA4P78363 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ABCA4P78363 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.37■□□□□ 0.21
ABCA4P78363 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ABCA4P78363 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ABCA4P78363 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ABCA4P78363 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
ABCA4P78363 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ABCA4P78363 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ABCA4P78363 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ABCA4P78363 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ABCA4P78363 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ABCA4P78363 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ABCA4P78363 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ABCA4P78363 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
ABCA4P78363 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ABCA4P78363 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ABCA4P78363 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ABCA4P78363 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ABCA4P78363 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ABCA4P78363 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.36■□□□□ 0.21
ABCA4P78363 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ABCA4P78363 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.36■□□□□ 0.21
ABCA4P78363 AC099778.1-201ENST00000568593 1911 ntBASIC16.36■□□□□ 0.21
ABCA4P78363 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ABCA4P78363 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ABCA4P78363 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ABCA4P78363 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ABCA4P78363 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ABCA4P78363 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ABCA4P78363 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ABCA4P78363 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.36■□□□□ 0.21
ABCA4P78363 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ABCA4P78363 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.35■□□□□ 0.21
ABCA4P78363 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.35■□□□□ 0.21
ABCA4P78363 PVRIG2P-201ENST00000435460 978 ntBASIC16.35■□□□□ 0.21
ABCA4P78363 AP000347.1-202ENST00000435868 847 ntBASIC16.35■□□□□ 0.21
ABCA4P78363 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
ABCA4P78363 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.35■□□□□ 0.21
ABCA4P78363 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.35■□□□□ 0.21
ABCA4P78363 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
ABCA4P78363 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.35■□□□□ 0.21
ABCA4P78363 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.35■□□□□ 0.21
ABCA4P78363 ATP5G2P1-201ENST00000433580 426 ntBASIC16.35■□□□□ 0.21
ABCA4P78363 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.35■□□□□ 0.21
ABCA4P78363 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.35■□□□□ 0.21
ABCA4P78363 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.35■□□□□ 0.21
ABCA4P78363 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ABCA4P78363 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.35■□□□□ 0.21
ABCA4P78363 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ABCA4P78363 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.35■□□□□ 0.21
ABCA4P78363 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.35■□□□□ 0.21
ABCA4P78363 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.34■□□□□ 0.21
ABCA4P78363 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ABCA4P78363 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.34■□□□□ 0.21
ABCA4P78363 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ABCA4P78363 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCA4P78363 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCA4P78363 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCA4P78363 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCA4P78363 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.34■□□□□ 0.21
ABCA4P78363 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.34■□□□□ 0.21
ABCA4P78363 AP002383.4-201ENST00000442518 975 ntBASIC16.34■□□□□ 0.21
ABCA4P78363 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.34■□□□□ 0.21
ABCA4P78363 IFNL4P1-201ENST00000607083 540 ntBASIC16.34■□□□□ 0.21
ABCA4P78363 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.34■□□□□ 0.21
ABCA4P78363 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.34■□□□□ 0.21
ABCA4P78363 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCA4P78363 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ABCA4P78363 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCA4P78363 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.34■□□□□ 0.21
ABCA4P78363 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ABCA4P78363 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ABCA4P78363 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.34■□□□□ 0.21
ABCA4P78363 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms