Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HIST1H3AP68431 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HIST1H3AP68431 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.65■□□□□ 0.26
HIST1H3AP68431 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HIST1H3AP68431 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H3AP68431 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HIST1H3AP68431 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HIST1H3AP68431 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H3AP68431 RCC2P6-201ENST00000526625 1557 ntBASIC16.64■□□□□ 0.25
HIST1H3AP68431 AL020996.1-203ENST00000536896 2307 ntBASIC16.64■□□□□ 0.25
HIST1H3AP68431 AL031598.1-201ENST00000561511 1773 ntBASIC16.64■□□□□ 0.25
HIST1H3AP68431 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H3AP68431 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST1H3AP68431 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H3AP68431 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.64■□□□□ 0.25
HIST1H3AP68431 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H3AP68431 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST1H3AP68431 AC091390.4-202ENST00000476426 537 ntBASIC16.64■□□□□ 0.25
HIST1H3AP68431 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST1H3AP68431 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST1H3AP68431 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.64■□□□□ 0.25
HIST1H3AP68431 FAM197Y4-202ENST00000622692 608 ntBASIC16.64■□□□□ 0.25
HIST1H3AP68431 AC083906.6-201ENST00000641366 219 ntBASIC16.64■□□□□ 0.25
HIST1H3AP68431 AL031985.4-201ENST00000642138 673 ntBASIC16.64■□□□□ 0.25
HIST1H3AP68431 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H3AP68431 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H3AP68431 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H3AP68431 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H3AP68431 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H3AP68431 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST1H3AP68431 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H3AP68431 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H3AP68431 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H3AP68431 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H3AP68431 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H3AP68431 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H3AP68431 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H3AP68431 AC004951.3-201ENST00000418645 1148 ntBASIC16.63■□□□□ 0.25
HIST1H3AP68431 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H3AP68431 AC098590.1-201ENST00000468126 897 ntBASIC16.63■□□□□ 0.25
HIST1H3AP68431 PRSS44-201ENST00000515154 1146 ntBASIC16.63■□□□□ 0.25
HIST1H3AP68431 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H3AP68431 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H3AP68431 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST1H3AP68431 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 AL135905.2-201ENST00000584934 1404 ntBASIC16.62■□□□□ 0.25
HIST1H3AP68431 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H3AP68431 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H3AP68431 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H3AP68431 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H3AP68431 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H3AP68431 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H3AP68431 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H3AP68431 GCSHP5-201ENST00000443090 522 ntBASIC16.62■□□□□ 0.25
HIST1H3AP68431 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H3AP68431 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 AC142381.4-202ENST00000563973 229 ntBASIC16.62■□□□□ 0.25
HIST1H3AP68431 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 AC130371.2-201ENST00000619443 611 ntBASIC16.62■□□□□ 0.25
HIST1H3AP68431 CR392000.1-201ENST00000624770 1228 ntBASIC16.62■□□□□ 0.25
HIST1H3AP68431 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H3AP68431 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H3AP68431 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H3AP68431 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H3AP68431 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST1H3AP68431 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms