Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 CDV3P1-201ENST00000471403 739 ntBASIC17.17■□□□□ 0.34
LSM3P62310 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.17■□□□□ 0.34
LSM3P62310 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LSM3P62310 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.17■□□□□ 0.34
LSM3P62310 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.17■□□□□ 0.34
LSM3P62310 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.17■□□□□ 0.34
LSM3P62310 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.17■□□□□ 0.34
LSM3P62310 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.17■□□□□ 0.34
LSM3P62310 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.17■□□□□ 0.34
LSM3P62310 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.17■□□□□ 0.34
LSM3P62310 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LSM3P62310 AC084018.2-201ENST00000613093 2607 ntBASIC17.17■□□□□ 0.34
LSM3P62310 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LSM3P62310 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM3P62310 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM3P62310 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM3P62310 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 AC124067.4-201ENST00000519691 2379 ntBASIC17.16■□□□□ 0.34
LSM3P62310 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM3P62310 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM3P62310 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.16■□□□□ 0.34
LSM3P62310 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
LSM3P62310 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LSM3P62310 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM3P62310 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.16■□□□□ 0.34
LSM3P62310 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.16■□□□□ 0.34
LSM3P62310 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.16■□□□□ 0.34
LSM3P62310 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.16■□□□□ 0.34
LSM3P62310 AC243732.1-201ENST00000612648 864 ntBASIC17.16■□□□□ 0.34
LSM3P62310 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.16■□□□□ 0.34
LSM3P62310 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.16■□□□□ 0.34
LSM3P62310 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LSM3P62310 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LSM3P62310 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSM3P62310 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LSM3P62310 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.15■□□□□ 0.34
LSM3P62310 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
LSM3P62310 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.15■□□□□ 0.34
LSM3P62310 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.15■□□□□ 0.34
LSM3P62310 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 AC134043.2-201ENST00000624206 2238 ntBASIC17.15■□□□□ 0.34
LSM3P62310 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 UNC93B3-201ENST00000308076 687 ntBASIC17.15■□□□□ 0.34
LSM3P62310 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 AC097381.1-201ENST00000429019 1296 ntBASIC17.15■□□□□ 0.34
LSM3P62310 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.15■□□□□ 0.34
LSM3P62310 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.15■□□□□ 0.34
LSM3P62310 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.15■□□□□ 0.34
LSM3P62310 DUX4L2-201ENST00000561772 1275 ntBASIC17.15■□□□□ 0.34
LSM3P62310 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
LSM3P62310 DUX4L6-201ENST00000626483 1275 ntBASIC17.15■□□□□ 0.34
LSM3P62310 DUX4L1-201ENST00000627662 1275 ntBASIC17.15■□□□□ 0.34
LSM3P62310 DUX4L8-201ENST00000629013 1275 ntBASIC17.15■□□□□ 0.34
LSM3P62310 DUX4L3-201ENST00000630187 1275 ntBASIC17.15■□□□□ 0.34
LSM3P62310 DUX4L7-201ENST00000630678 1275 ntBASIC17.15■□□□□ 0.34
LSM3P62310 DUX4L5-201ENST00000630834 1275 ntBASIC17.15■□□□□ 0.34
LSM3P62310 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.15■□□□□ 0.34
LSM3P62310 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM3P62310 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
LSM3P62310 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.15■□□□□ 0.34
LSM3P62310 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.15■□□□□ 0.34
LSM3P62310 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms