Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS1BP61024 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.31□□□□□ -0.28
CKS1BP61024 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CKS1BP61024 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.31□□□□□ -0.28
CKS1BP61024 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CKS1BP61024 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CKS1BP61024 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.31□□□□□ -0.28
CKS1BP61024 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.31□□□□□ -0.28
CKS1BP61024 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.31□□□□□ -0.28
CKS1BP61024 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CKS1BP61024 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS1BP61024 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS1BP61024 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.31□□□□□ -0.28
CKS1BP61024 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CKS1BP61024 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS1BP61024 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS1BP61024 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS1BP61024 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CKS1BP61024 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.3□□□□□ -0.28
CKS1BP61024 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.3□□□□□ -0.28
CKS1BP61024 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.3□□□□□ -0.28
CKS1BP61024 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.3□□□□□ -0.28
CKS1BP61024 SLC7A5P1-201ENST00000568957 537 ntBASIC13.3□□□□□ -0.28
CKS1BP61024 AL139246.5-201ENST00000606645 996 ntBASIC13.3□□□□□ -0.28
CKS1BP61024 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CKS1BP61024 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CKS1BP61024 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.3□□□□□ -0.28
CKS1BP61024 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.3□□□□□ -0.28
CKS1BP61024 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.3□□□□□ -0.28
CKS1BP61024 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.3□□□□□ -0.28
CKS1BP61024 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.3□□□□□ -0.28
CKS1BP61024 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CKS1BP61024 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CKS1BP61024 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CKS1BP61024 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.3□□□□□ -0.28
CKS1BP61024 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.3□□□□□ -0.28
CKS1BP61024 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CKS1BP61024 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
CKS1BP61024 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.29□□□□□ -0.28
CKS1BP61024 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CKS1BP61024 AC005332.7-201ENST00000614046 2005 ntBASIC13.29□□□□□ -0.28
CKS1BP61024 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CKS1BP61024 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CKS1BP61024 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.29□□□□□ -0.28
CKS1BP61024 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CKS1BP61024 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.29□□□□□ -0.28
CKS1BP61024 AL356652.1-201ENST00000615962 565 ntBASIC13.29□□□□□ -0.28
CKS1BP61024 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.29□□□□□ -0.28
CKS1BP61024 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.29□□□□□ -0.28
CKS1BP61024 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CKS1BP61024 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.29□□□□□ -0.28
CKS1BP61024 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CKS1BP61024 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
CKS1BP61024 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CKS1BP61024 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.28□□□□□ -0.28
CKS1BP61024 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CKS1BP61024 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CKS1BP61024 AC103702.1-201ENST00000548801 2630 ntBASIC13.28□□□□□ -0.28
CKS1BP61024 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.28□□□□□ -0.28
CKS1BP61024 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CKS1BP61024 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.28□□□□□ -0.28
CKS1BP61024 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CKS1BP61024 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.28□□□□□ -0.28
CKS1BP61024 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CKS1BP61024 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.28□□□□□ -0.28
CKS1BP61024 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CKS1BP61024 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CKS1BP61024 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CKS1BP61024 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms