Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH13P55290 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH13P55290 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CDH13P55290 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CDH13P55290 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDH13P55290 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDH13P55290 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH13P55290 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDH13P55290 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CDH13P55290 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.63■□□□□ 0.57
CDH13P55290 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH13P55290 PRKY-204ENST00000533551 1019 ntBASIC18.63■□□□□ 0.57
CDH13P55290 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CDH13P55290 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDH13P55290 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 NBPF21P-201ENST00000425093 1451 ntBASIC18.63■□□□□ 0.57
CDH13P55290 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH13P55290 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDH13P55290 AC093525.10-201ENST00000625130 1569 ntBASIC18.63■□□□□ 0.57
CDH13P55290 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH13P55290 Z98044.1-201ENST00000632503 1764 ntBASIC18.63■□□□□ 0.57
CDH13P55290 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH13P55290 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH13P55290 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.62■□□□□ 0.57
CDH13P55290 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.62■□□□□ 0.57
CDH13P55290 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.62■□□□□ 0.57
CDH13P55290 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH13P55290 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH13P55290 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH13P55290 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH13P55290 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CDH13P55290 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH13P55290 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDH13P55290 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.61■□□□□ 0.57
CDH13P55290 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH13P55290 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.61■□□□□ 0.57
CDH13P55290 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.61■□□□□ 0.57
CDH13P55290 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH13P55290 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.61■□□□□ 0.57
CDH13P55290 HLA-A-209ENST00000638375 975 ntBASIC18.61■□□□□ 0.57
CDH13P55290 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH13P55290 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH13P55290 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH13P55290 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH13P55290 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
CDH13P55290 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH13P55290 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH13P55290 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH13P55290 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CDH13P55290 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms