Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LIMK2P53671 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.2■□□□□ 0.66
LIMK2P53671 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.2■□□□□ 0.66
LIMK2P53671 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.2■□□□□ 0.66
LIMK2P53671 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.2■□□□□ 0.66
LIMK2P53671 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LIMK2P53671 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.2■□□□□ 0.66
LIMK2P53671 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LIMK2P53671 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 NEFHP1-201ENST00000412845 2629 ntBASIC19.19■□□□□ 0.66
LIMK2P53671 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LIMK2P53671 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
LIMK2P53671 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.19■□□□□ 0.66
LIMK2P53671 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LIMK2P53671 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.19■□□□□ 0.66
LIMK2P53671 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.19■□□□□ 0.66
LIMK2P53671 HTR7P1-201ENST00000538670 1336 ntBASIC19.19■□□□□ 0.66
LIMK2P53671 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LIMK2P53671 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK2P53671 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
LIMK2P53671 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.19■□□□□ 0.66
LIMK2P53671 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.19■□□□□ 0.66
LIMK2P53671 AC093525.10-201ENST00000625130 1569 ntBASIC19.19■□□□□ 0.66
LIMK2P53671 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LIMK2P53671 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.18■□□□□ 0.66
LIMK2P53671 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LIMK2P53671 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
LIMK2P53671 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.18■□□□□ 0.66
LIMK2P53671 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LIMK2P53671 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.18■□□□□ 0.66
LIMK2P53671 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LIMK2P53671 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.18■□□□□ 0.66
LIMK2P53671 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LIMK2P53671 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.18■□□□□ 0.66
LIMK2P53671 AL353807.1-201ENST00000427475 662 ntBASIC19.18■□□□□ 0.66
LIMK2P53671 TUBB8P6-201ENST00000436895 1288 ntBASIC19.18■□□□□ 0.66
LIMK2P53671 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.18■□□□□ 0.66
LIMK2P53671 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.18■□□□□ 0.66
LIMK2P53671 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.18■□□□□ 0.66
LIMK2P53671 AF186192.3-201ENST00000583427 947 ntBASIC19.18■□□□□ 0.66
LIMK2P53671 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.18■□□□□ 0.66
LIMK2P53671 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.18■□□□□ 0.66
LIMK2P53671 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.18■□□□□ 0.66
LIMK2P53671 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.18■□□□□ 0.66
LIMK2P53671 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
LIMK2P53671 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.18■□□□□ 0.66
LIMK2P53671 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LIMK2P53671 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.18■□□□□ 0.66
LIMK2P53671 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK2P53671 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LIMK2P53671 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms