Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB5CP51148 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB5CP51148 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
RAB5CP51148 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RAB5CP51148 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.32■□□□□ 0.04
RAB5CP51148 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB5CP51148 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB5CP51148 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RAB5CP51148 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.32■□□□□ 0.04
RAB5CP51148 AC091799.1-201ENST00000422823 811 ntBASIC15.32■□□□□ 0.04
RAB5CP51148 SLC25A6P5-201ENST00000435663 894 ntBASIC15.32■□□□□ 0.04
RAB5CP51148 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB5CP51148 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.32■□□□□ 0.04
RAB5CP51148 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.32■□□□□ 0.04
RAB5CP51148 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB5CP51148 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB5CP51148 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
RAB5CP51148 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB5CP51148 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB5CP51148 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RAB5CP51148 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB5CP51148 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB5CP51148 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
RAB5CP51148 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB5CP51148 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB5CP51148 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 KRT16P3-201ENST00000439127 1283 ntBASIC15.31■□□□□ 0.04
RAB5CP51148 AC105265.2-201ENST00000467189 838 ntBASIC15.31■□□□□ 0.04
RAB5CP51148 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB5CP51148 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB5CP51148 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB5CP51148 AC126544.1-201ENST00000580842 1059 ntBASIC15.31■□□□□ 0.04
RAB5CP51148 AC243732.1-201ENST00000612648 864 ntBASIC15.31■□□□□ 0.04
RAB5CP51148 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB5CP51148 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB5CP51148 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB5CP51148 AC087633.2-202ENST00000565166 1439 ntBASIC15.31■□□□□ 0.04
RAB5CP51148 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB5CP51148 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB5CP51148 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB5CP51148 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB5CP51148 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RAB5CP51148 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB5CP51148 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAB5CP51148 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB5CP51148 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB5CP51148 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB5CP51148 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RAB5CP51148 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB5CP51148 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB5CP51148 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB5CP51148 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB5CP51148 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB5CP51148 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB5CP51148 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB5CP51148 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB5CP51148 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB5CP51148 MST1L-201ENST00000442552 2185 ntBASIC15.3■□□□□ 0.04
RAB5CP51148 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB5CP51148 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB5CP51148 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB5CP51148 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms