Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A12P48065 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SLC6A12P48065 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC6A12P48065 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A12P48065 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SLC6A12P48065 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A12P48065 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A12P48065 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC6A12P48065 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A12P48065 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A12P48065 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC6A12P48065 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A12P48065 Z98044.1-201ENST00000632503 1764 ntBASIC18.38■□□□□ 0.53
SLC6A12P48065 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLC6A12P48065 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC6A12P48065 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SLC6A12P48065 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A12P48065 FAM207BP-201ENST00000447172 505 ntBASIC18.38■□□□□ 0.53
SLC6A12P48065 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A12P48065 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC6A12P48065 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.38■□□□□ 0.53
SLC6A12P48065 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A12P48065 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC6A12P48065 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A12P48065 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SLC6A12P48065 FSCN1P1-201ENST00000568912 1481 ntBASIC18.38■□□□□ 0.53
SLC6A12P48065 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A12P48065 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC6A12P48065 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A12P48065 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A12P48065 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A12P48065 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SLC6A12P48065 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A12P48065 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A12P48065 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A12P48065 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A12P48065 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
SLC6A12P48065 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SLC6A12P48065 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC6A12P48065 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC6A12P48065 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A12P48065 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
SLC6A12P48065 AC116562.2-201ENST00000507042 360 ntBASIC18.37■□□□□ 0.53
SLC6A12P48065 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC6A12P48065 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLC6A12P48065 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC6A12P48065 AC113410.3-201ENST00000623366 203 ntBASIC18.37■□□□□ 0.53
SLC6A12P48065 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A12P48065 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A12P48065 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC6A12P48065 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SLC6A12P48065 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A12P48065 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A12P48065 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A12P48065 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
SLC6A12P48065 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A12P48065 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A12P48065 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SLC6A12P48065 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A12P48065 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SLC6A12P48065 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
SLC6A12P48065 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SLC6A12P48065 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A12P48065 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SLC6A12P48065 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A12P48065 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.36■□□□□ 0.53
SLC6A12P48065 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A12P48065 NUDT16P1-203ENST00000513809 620 ntBASIC18.36■□□□□ 0.53
SLC6A12P48065 KRT8P3-201ENST00000519669 1449 ntBASIC18.36■□□□□ 0.53
SLC6A12P48065 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC6A12P48065 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SLC6A12P48065 AP000692.2-201ENST00000608391 879 ntBASIC18.36■□□□□ 0.53
SLC6A12P48065 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A12P48065 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A12P48065 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC6A12P48065 AL049637.2-201ENST00000641778 930 ntBASIC18.36■□□□□ 0.53
SLC6A12P48065 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A12P48065 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A12P48065 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A12P48065 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SLC6A12P48065 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC6A12P48065 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms